STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QX66Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
A0A2Z6RGZ2
Uncharacterized protein.
   
 
 0.514
A0A2Z6Q628
Uncharacterized protein.
   
 0.508
A0A2Z6RY40
Uncharacterized protein.
   
 0.472
A0A2Z6RAU2
Uncharacterized protein.
   
 0.416
A0A2Z6RND5
Uncharacterized protein.
   
 0.416
A0A2Z6QXH2
Uncharacterized protein.
    
 
 0.415
A0A2Z6QJA1
Uncharacterized protein.
    
 
 0.408
A0A2Z6REC6
Uncharacterized protein.
    
 
 0.408
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.