STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QXF1Uncharacterized protein. (879 aa)    
Predicted Functional Partners:
A0A2Z6R5J6
RRM domain-containing protein.
    
 
 0.976
A0A2Z6RAY9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.952
A0A2Z6QYD5
Uncharacterized protein.
   
 
 0.918
A0A2Z6RZY2
Uncharacterized protein.
   
 
 0.918
A0A2Z6RVD7
Uncharacterized protein.
    
 
 0.865
A0A2Z6SGR1
Nuclear cap-binding protein subunit 2.
   
 
 0.816
A0A2Z6S7H6
MIF4G domain-containing protein.
   
 
 0.764
A0A2Z6S3W6
mRNA cap 0 methyltransferase domain-containing protein.
   
 
 0.753
A0A2Z6SGH6
RPOLD domain-containing protein.
   
 
 0.741
A0A2Z6SF00
CID domain-containing protein.
   
 
0.721
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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