STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QXR8Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
A0A2Z6SDI9
Uncharacterized protein.
   
 0.999
A0A2Z6QX92
Uncharacterized protein.
   
 0.896
A0A2Z6R885
Uncharacterized protein.
    
  0.824
A0A2Z6REU9
RRM domain-containing protein.
   
 0.814
A0A2Z6RJP2
RRM domain-containing protein.
   
 0.812
A0A2Z6QC88
RRM domain-containing protein.
    
 0.794
A0A2Z6RBI1
WD_REPEATS_REGION domain-containing protein.
     
 0.789
A0A2Z6QX99
Slu7 domain-containing protein.
     
 0.784
A0A2Z6RUJ8
RRM domain-containing protein.
   
 0.777
A0A2Z6SBA0
RRM domain-containing protein.
   
 0.777
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.