STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QYP9Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
A0A2Z6QZI9
Uncharacterized protein.
    
 0.744
A0A2Z6QXU3
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.707
A0A2Z6S387
Dimer_Tnp_hAT domain-containing protein.
   
 0.706
A0A2Z6S7C9
Histone H2A; Belongs to the histone H2A family.
   
 0.650
A0A2Z6S6F3
Uncharacterized protein.
    
  0.620
A0A2Z6RYJ7
Uncharacterized protein.
    
 0.607
A0A2Z6RA42
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.595
A0A2Z6RSB5
E2F_TDP domain-containing protein.
   
 0.583
A0A2Z6QIF8
Histone H3; Belongs to the histone H3 family.
    
 0.565
A0A2Z6QJ45
Histone domain-containing protein.
    
 0.565
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.