STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSF1Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (373 aa)    
Predicted Functional Partners:
A0A2Z6SRB3
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 0.999
A0A2Z6SE62
Uncharacterized protein.
  
 
 0.991
A0A2Z6S6D2
RRF domain-containing protein.
  
 
 0.982
A0A2Z6RH44
Uncharacterized protein.
  
 0.980
A0A2Z6RMH2
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.977
A0A2Z6SLR6
Uncharacterized protein.
  
 0.977
A0A2Z6RT26
Uncharacterized protein.
  
 
 0.975
A0A2Z6S9D5
Uncharacterized protein.
  
 
 0.971
A0A2Z6S1E7
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
  
 0.969
A0A2Z6RZH5
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
  
 0.967
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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