STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R0H5Proteasome subunit beta; Belongs to the peptidase T1B family. (246 aa)    
Predicted Functional Partners:
A0A2Z6Q4X5
Proteasome subunit alpha type.
   
 0.999
A0A2Z6QGG6
Proteasome subunit beta.
   
 0.999
A0A2Z6QGX0
Proteasome subunit alpha type.
   
 0.999
A0A2Z6QH06
Proteasome subunit alpha type.
   
 0.999
A0A2Z6QIZ1
Proteasome subunit beta.
   
0.999
A0A2Z6QK30
Proteasome subunit beta.
   
 0.999
A0A2Z6QL30
Proteasome subunit alpha type.
   
 0.999
A0A2Z6QQ95
Proteasome subunit beta.
   
 0.999
A0A2Z6QSZ2
VWFA domain-containing protein.
   
 0.999
A0A2Z6QTI2
Proteasome subunit beta.
   
 0.999
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.