STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R1H4Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
A0A2Z6QAB8
Uncharacterized protein.
 
     0.531
A0A2Z6QJK4
Uncharacterized protein.
 
     0.530
A0A2Z6QYR1
Uncharacterized protein.
 
     0.527
A0A2Z6QVQ6
Uncharacterized protein.
 
     0.491
A0A2Z6S7R1
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.491
A0A2Z6QQP4
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.463
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.