STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R2Z8Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (306 aa)    
Predicted Functional Partners:
A0A2Z6QMB2
GYF domain-containing protein.
    
 
 0.807
A0A2Z6QD44
Uncharacterized protein.
    
 
 0.763
A0A2Z6RT47
Uncharacterized protein.
    
 0.753
A0A2Z6SHM7
RING-type domain-containing protein.
     
 0.627
A0A2Z6QEP8
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
     
0.599
A0A2Z6Q5V7
RBR-type E3 ubiquitin transferase.
    
 0.594
A0A2Z6RXE8
RBR-type E3 ubiquitin transferase.
    
 0.594
A0A2Z6S1A4
RBR-type E3 ubiquitin transferase.
    
 0.594
A0A2Z6S3Z8
RBR-type E3 ubiquitin transferase.
    
 0.594
A0A2Z6QIZ1
Proteasome subunit beta.
 
      0.568
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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