STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R3V9PPR_long domain-containing protein. (345 aa)    
Predicted Functional Partners:
A0A2Z6QPG0
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.821
A0A2Z6R3Z6
Spindle pole body component.
    
  0.752
A0A2Z6QK42
S4 RNA-binding domain-containing protein.
   
 
 0.731
A0A2Z6QGR7
Uncharacterized protein.
    
   0.729
A0A2Z6RPF3
Uncharacterized protein.
    
   0.729
A0A2Z6SB67
Uncharacterized protein.
    
 
 0.729
A0A2Z6QNP3
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.692
A0A2Z6SDI1
Spindle pole body component.
    
 0.671
A0A2Z6S5U2
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.656
A0A2Z6S9D5
Uncharacterized protein.
    
 
 0.643
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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