STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R521Ubiquitin-like domain-containing protein. (337 aa)    
Predicted Functional Partners:
A0A2Z6S9R2
MPN domain-containing protein.
   
  0.979
A0A2Z6SN01
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.913
A0A2Z6S8Y1
Uncharacterized protein.
   
 0.909
A0A2Z6QQ81
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.908
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.907
A0A2Z6RH31
Ribosomal_S17_N domain-containing protein.
   
 0.906
A0A2Z6RNY5
Uncharacterized protein.
   
 0.906
A0A2Z6S1E7
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.906
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.905
A0A2Z6R016
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.905
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.