STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R555Lactamase_B domain-containing protein. (372 aa)    
Predicted Functional Partners:
A0A2Z6QAL4
Endonuclease.
   
   0.960
A0A2Z6Q2F3
Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P).
    
   0.686
A0A2Z6RJF8
Uncharacterized protein.
  
 
 0.682
A0A2Z6RS72
RNase_PH domain-containing protein.
  
 
 0.682
A0A2Z6S4Q3
Uncharacterized protein.
  
 
 0.682
A0A2Z6RLJ7
WD_REPEATS_REGION domain-containing protein.
   
    0.646
A0A2Z6QYX0
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.645
A0A2Z6Q4L7
Uncharacterized protein.
  
 
 0.626
A0A2Z6QV25
Uncharacterized protein.
   
  
 0.607
A0A2Z6QSG3
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.594
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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