STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R8F1BTB domain-containing protein. (353 aa)    
Predicted Functional Partners:
A0A2Z6RLT3
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.852
A0A2Z6SCT4
Uncharacterized protein.
    
 
 0.702
A0A2Z6SHZ4
DPH-type MB domain-containing protein.
    
 
 0.617
A0A2Z6RIE6
CS domain-containing protein.
    
  0.604
A0A2Z6Q6I1
Uncharacterized protein.
    
 0.591
A0A2Z6S6J6
Uncharacterized protein.
    
 0.591
A0A2Z6RRC3
HECT domain-containing protein.
    
  0.585
A0A2Z6RMV6
Uncharacterized protein.
    
 
 0.579
A0A2Z6SEX0
Uncharacterized protein.
    
 
 0.579
A0A2Z6RWR0
FHA domain-containing protein.
    
  0.570
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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