STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R8P1Uncharacterized protein. (562 aa)    
Predicted Functional Partners:
A0A2Z6RGQ4
Uncharacterized protein.
    
  0.451
A0A2Z6Q898
Uncharacterized protein.
     
 0.439
A0A2Z6RWT9
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  0.432
A0A2Z6S1G1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.431
A0A2Z6R6Y7
UDP-glucose 6-dehydrogenase.
     
 0.430
A0A2Z6RRS9
Abhydrolase_3 domain-containing protein.
     
 0.426
A0A2Z6RB58
Uncharacterized protein.
     
 0.422
A0A2Z6QKH1
Aldo_ket_red domain-containing protein.
   
 
  0.418
A0A2Z6QYL8
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
     
 0.411
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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