STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R8Y2EF-hand domain-containing protein. (265 aa)    
Predicted Functional Partners:
A0A2Z6S564
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.810
A0A2Z6SA11
Cytochrome b5 heme-binding domain-containing protein.
  
 
 0.810
A0A2Z6SD03
Uncharacterized protein.
  
 
 0.810
A0A2Z6QWR7
Rhodanese domain-containing protein.
  
 0.746
A0A2Z6RTJ9
Rhodanese domain-containing protein.
  
 0.746
A0A2Z6RVT7
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
     
 0.746
A0A2Z6QFW2
4-hydroxyphenylpyruvate dioxygenase.
    
 0.705
A0A2Z6RSG4
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.630
A0A2Z6Q4C6
Uncharacterized protein.
  
 0.617
A0A2Z6S8C3
2Fe-2S ferredoxin-type domain-containing protein.
     
 0.601
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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