STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RD21Uncharacterized protein. (1552 aa)    
Predicted Functional Partners:
A0A2Z6RUH4
Uncharacterized protein.
    
 0.656
A0A2Z6QPE0
Ubiquitin carboxyl-terminal hydrolase.
    
  0.649
A0A2Z6QEM2
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.626
A0A2Z6RY48
RING-type domain-containing protein.
    
 0.615
A0A2Z6R352
Uncharacterized protein.
    
 0.611
A0A2Z6RNA7
USP domain-containing protein.
    
  0.607
A0A2Z6SDZ9
Uncharacterized protein.
    
  0.594
A0A2Z6SK28
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.581
A0A2Z6QG45
Putative acetyl-CoA carboxylase (ACC).
 
 
 0.560
A0A2Z6S2B5
ENTH domain-containing protein.
    
 0.556
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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