STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RD34L51_S25_CI-B8 domain-containing protein. (137 aa)    
Predicted Functional Partners:
A0A2Z6QNP3
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.994
A0A2Z6RT26
Uncharacterized protein.
   
 
 0.994
A0A2Z6S5F6
Uncharacterized protein.
   
 
 0.994
A0A2Z6QDH5
Ribosomal_S10 domain-containing protein.
   
 
 0.992
A0A2Z6SCN2
Uncharacterized protein.
   
 
 0.992
A0A2Z6Q6F1
Uncharacterized protein.
   
 
 0.991
A0A2Z6RPT4
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.991
A0A2Z6RE84
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.990
A0A2Z6RUA8
Uncharacterized protein.
   
 
 0.990
A0A2Z6RH44
Uncharacterized protein.
   
 
 0.989
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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