STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RDP7Uncharacterized protein. (275 aa)    
Predicted Functional Partners:
A0A2Z6S9D9
Triosephosphate isomerase.
  
 0.916
A0A2Z6RGM0
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
   
 0.907
A0A2Z6QI91
Uncharacterized protein.
  
 0.847
A0A2Z6SC56
Uncharacterized protein.
  
 0.847
A0A2Z6S425
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.787
A0A2Z6QAH1
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 
 0.750
A0A2Z6QWX6
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.731
A0A2Z6RWV2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
  
 
 0.731
A0A2Z6S2S6
VWFA domain-containing protein.
  
 
 0.731
A0A2Z6Q582
RIBOSOMAL_L9 domain-containing protein.
   
 
 0.724
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.