STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RE84Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (144 aa)    
Predicted Functional Partners:
A0A2Z6R7V8
Uncharacterized protein.
  
 
 0.998
A0A2Z6RCT4
KOW domain-containing protein.
  
 0.998
A0A2Z6RMH2
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.998
A0A2Z6RSH4
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
A0A2Z6RT26
Uncharacterized protein.
   
 
 0.998
A0A2Z6RUA8
Uncharacterized protein.
  
 0.998
A0A2Z6RV84
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
A0A2Z6QWV4
Ribosomal_L2_C domain-containing protein.
  
 0.997
A0A2Z6RH44
Uncharacterized protein.
  
 
 0.997
A0A2Z6RK08
Uncharacterized protein.
  
 
 0.997
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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