STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6REC7Thymidylat_synt domain-containing protein. (334 aa)    
Predicted Functional Partners:
A0A2Z6RYI5
DHFR domain-containing protein.
 
 
 0.995
A0A2Z6RDQ5
Uncharacterized protein.
  
 
 0.938
A0A2Z6R966
CMP/dCMP-type deaminase domain-containing protein.
  
 
 0.935
A0A2Z6QV37
dNK domain-containing protein.
  
 0.934
A0A2Z6SGJ1
dUTPase domain-containing protein.
  
 
 0.922
A0A2Z6SQA9
Thymidylate_kin domain-containing protein.
  
 
 0.921
A0A2Z6SFE0
Flavoprotein domain-containing protein.
 
   
 0.919
A0A2Z6SC04
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.909
A0A2Z6REZ2
Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...]
 
 
    0.908
A0A2Z6RI30
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.897
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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