STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RG68Alpha-galactosidase. (429 aa)    
Predicted Functional Partners:
A0A2Z6Q170
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
   
 
 0.854
A0A2Z6RZS0
Uncharacterized protein.
   
 
 0.672
A0A2Z6SIG9
Beta-hexosaminidase.
   
 
 0.660
A0A2Z6QEH1
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.619
A0A2Z6RBT5
Fe2OG dioxygenase domain-containing protein.
   
 
 0.605
A0A2Z6RSM4
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.605
A0A2Z6RXX4
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.600
A0A2Z6R6Z3
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
  0.560
A0A2Z6R024
Uncharacterized protein.
   
  0.558
A0A2Z6RYY5
Aamy domain-containing protein.
   
 
 0.558
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.