STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RIP8Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
A0A2Z6QUW8
Uncharacterized protein.
   
 
 0.977
A0A2Z6R1Y2
Uncharacterized protein.
   
 
 0.977
A0A2Z6S147
Nudix hydrolase domain-containing protein.
   
 
 0.972
A0A2Z6R7V8
Uncharacterized protein.
   
 
 0.967
A0A2Z6RPZ9
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.954
A0A2Z6QT67
MRP-S28 domain-containing protein.
   
   0.949
A0A2Z6QNP3
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.947
A0A2Z6R8U2
Uncharacterized protein.
   
 
 0.946
A0A2Z6R165
Uncharacterized protein.
   
 
 0.944
A0A2Z6RSW0
RNase III domain-containing protein.
   
 
 0.944
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.