STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RLC1Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
A0A2Z6RDA2
Serine/threonine-protein phosphatase.
   
 0.998
A0A2Z6RQW1
Peptidylprolyl isomerase.
   
 0.992
A0A2Z6RC62
WD_REPEATS_REGION domain-containing protein.
 
  
 0.985
A0A2Z6RUH4
Uncharacterized protein.
    
 0.939
A0A2Z6RN20
Uncharacterized protein.
    
 
 0.877
A0A2Z6QSH9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.813
A0A2Z6S3I6
Uncharacterized protein.
    
 0.811
A0A2Z6SK82
Uncharacterized protein; Belongs to the calmodulin family.
    
0.811
A0A2Z6S2P4
TPR_REGION domain-containing protein.
    
  0.810
A0A2Z6RTK8
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.798
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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