STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RLE3Polysacc_synt_4 domain-containing protein. (144 aa)    
Predicted Functional Partners:
A0A2Z6RXV6
Uncharacterized protein.
    
   0.589
A0A2Z6S3F0
Tr-type G domain-containing protein.
    
   0.589
A0A2Z6S9R2
MPN domain-containing protein.
   
 
 0.581
A0A2Z6S4X0
Uncharacterized protein.
   
    0.532
A0A2Z6SI07
SWIRM domain-containing protein.
   
 
 0.520
A0A2Z6S2V0
Uncharacterized protein.
   
   0.482
A0A2Z6QUP6
Uncharacterized protein.
   
    0.478
A0A2Z6R7E8
PINc domain-containing protein.
   
    0.477
A0A2Z6RCD9
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.468
A0A2Z6SHE1
Transket_pyr domain-containing protein.
      
 0.457
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.