STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RME0Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family. (620 aa)    
Predicted Functional Partners:
A0A2Z6R255
PlsC domain-containing protein.
    
 0.908
A0A2Z6RU76
WD_REPEATS_REGION domain-containing protein.
     
 0.863
A0A2Z6QL15
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 
 0.861
A0A2Z6RW09
RING-type domain-containing protein.
     
 0.797
A0A2Z6RRQ0
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.795
A0A2Z6Q6C5
TPR_REGION domain-containing protein.
    
 0.778
A0A2Z6R2D4
TPR_REGION domain-containing protein.
    
 0.778
A0A2Z6RNK2
SH3 domain-containing protein.
   
 0.775
A0A2Z6RAL8
AB hydrolase-1 domain-containing protein.
    
 0.759
A0A2Z6RGT6
GRIP domain-containing protein.
    
 0.742
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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