STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RMF4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (435 aa)    
Predicted Functional Partners:
A0A2Z6SCB2
Uncharacterized protein.
    
 0.998
A0A2Z6RA09
Uncharacterized protein.
    
 0.994
A0A2Z6SG50
RIO domain-containing protein.
    
 0.992
A0A2Z6RCH8
Bms1-type G domain-containing protein.
    
 0.990
A0A2Z6SIS3
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.984
A0A2Z6R680
KH domain-containing protein.
    
 0.973
A0A2Z6SLJ0
Ribosomal_S10 domain-containing protein.
    
 0.967
A0A2Z6SAN1
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
  0.964
A0A2Z6RW17
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.963
A0A2Z6S657
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
    
  0.962
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
Server load: low (20%) [HD]