STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RMT7Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (437 aa)    
Predicted Functional Partners:
A0A2Z6SD89
MI domain-containing protein.
   
 0.898
A0A2Z6RN84
Uncharacterized protein.
  
0.857
A0A2Z6RBI1
WD_REPEATS_REGION domain-containing protein.
   
  0.856
A0A2Z6QPY7
SKIP_SNW domain-containing protein.
   
 0.839
A0A2Z6SRC6
Uncharacterized protein.
    
 0.830
A0A2Z6RIW7
Uncharacterized protein.
   
 0.829
A0A2Z6SMV4
Uncharacterized protein.
    
 0.825
A0A2Z6QC51
PWI domain-containing protein.
    
 0.814
A0A2Z6QK13
Uncharacterized protein.
    
 0.811
A0A2Z6SAW2
Uncharacterized protein.
    
 0.811
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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