STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RNK1Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
A0A2Z6QY14
Tryptophan synthase.
  
 
 0.888
A0A2Z6S7F8
Uncharacterized protein.
  
 
 0.857
A0A2Z6SQ41
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.856
A0A2Z6RDY7
PALP domain-containing protein.
 
 0.854
A0A2Z6QG50
PALP domain-containing protein.
 
 0.847
A0A2Z6RLI6
Uncharacterized protein.
 
 0.833
A0A2Z6RCD2
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.794
A0A2Z6S7K1
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.794
A0A2Z6RUT8
Flavodoxin-like domain-containing protein.
  
 
 0.768
A0A2Z6S4Y0
Hcy-binding domain-containing protein.
  
 
 0.751
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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