STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RPW9Uncharacterized protein. (1238 aa)    
Predicted Functional Partners:
A0A2Z6RQW1
Peptidylprolyl isomerase.
    
 
 0.909
A0A2Z6QTW8
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.825
A0A2Z6RKR9
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
   0.785
A0A2Z6RZH5
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
   0.785
A0A2Z6S1E7
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.785
A0A2Z6S8Y1
Uncharacterized protein.
    
   0.785
A0A2Z6SAN1
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.785
A0A2Z6RRC3
HECT domain-containing protein.
     
 0.781
A0A2Z6R9C7
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.777
A0A2Z6S9G2
Ribosomal_L18_c domain-containing protein.
    
   0.757
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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