STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RRV9Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)    
Predicted Functional Partners:
A0A2Z6R0S0
Uncharacterized protein.
   
 
 0.975
A0A2Z6SNI5
Protein disulfide-isomerase.
   
 0.913
A0A2Z6Q815
WD_REPEATS_REGION domain-containing protein.
   
 
 0.893
A0A2Z6SCT4
Uncharacterized protein.
   
 
 0.892
A0A2Z6QVC9
WD_REPEATS_REGION domain-containing protein.
   
 
 0.878
A0A2Z6QIF2
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
   0.865
A0A2Z6QGA6
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
   0.863
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
   0.859
A0A2Z6RIW7
Uncharacterized protein.
   
 0.858
A0A2Z6S1S5
Uncharacterized protein.
   
   0.858
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.