STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RSA4Fumarylacetoacetase. (405 aa)    
Predicted Functional Partners:
A0A2Z6RVP1
Uncharacterized protein.
 
 0.921
A0A2Z6QZZ0
Uncharacterized protein; Belongs to the GST superfamily.
  
 
 0.907
A0A2Z6QYP2
FAA_hydrolase domain-containing protein.
     
 0.862
A0A2Z6SK32
Uncharacterized protein.
   
 0.828
A0A2Z6RAS8
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.805
A0A2Z6R1Z0
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.783
A0A2Z6SKC9
Malate synthase; Belongs to the malate synthase family.
  
 
 0.776
A0A2Z6QFW2
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.768
A0A2Z6RJ12
Uncharacterized protein.
   
 
  0.764
A0A2Z6R297
FAA_hydrolase domain-containing protein.
     
 0.726
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.