STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RSG5Peptide hydrolase; Belongs to the peptidase M28 family. (387 aa)    
Predicted Functional Partners:
A0A2Z6RKG4
Uncharacterized protein.
 
      0.864
ALG13
UDP-N-acetylglucosamine transferase subunit ALG13; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.
     
 0.796
A0A2Z6S384
PCI domain-containing protein.
     
 0.780
A0A2Z6R3W7
Galactose-1-phosphate uridylyltransferase.
   
 
  0.769
A0A2Z6RIF6
Uncharacterized protein.
     
 0.716
A0A2Z6SM97
CYTOSOL_AP domain-containing protein.
     
 0.716
A0A2Z6SER1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.697
A0A2Z6SK28
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.696
A0A2Z6S8N4
Uncharacterized protein.
    
 0.668
A0A2Z6RGQ8
Sortilin.
     
 0.652
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.