STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RSU7Flavodoxin-like domain-containing protein. (746 aa)    
Predicted Functional Partners:
A0A2Z6RMR2
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.839
A0A2Z6Q9E1
TYW3 domain-containing protein.
  
  
 0.702
A0A2Z6QQR6
Uncharacterized protein.
   
 
 0.679
A0A2Z6SI92
Uncharacterized protein.
   
 
 0.679
A0A2Z6R0R2
Protein-L-isoaspartate O-methyltransferase.
   
    0.635
A0A2Z6R402
WD_REPEATS_REGION domain-containing protein.
   
 
 0.598
A0A2Z6SP15
Uncharacterized protein.
   
  
 0.549
A0A2Z6RRH1
Brix domain-containing protein.
   
   0.528
A0A2Z6SJ24
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
   
  
 0.527
A0A2Z6S0M4
NUC153 domain-containing protein.
   
    0.520
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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