STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RTT3HMG box domain-containing protein. (335 aa)    
Predicted Functional Partners:
A0A2Z6QJT3
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.792
A0A2Z6R2Z4
BSD domain-containing protein.
    
 0.770
A0A2Z6S7C9
Histone H2A; Belongs to the histone H2A family.
   
 0.768
A0A2Z6QMS6
Uncharacterized protein.
    
 0.763
A0A2Z6R505
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.759
A0A2Z6R1G4
Uncharacterized protein.
    
 0.754
A0A2Z6SBY3
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.748
A0A2Z6S7D0
Uncharacterized protein; Belongs to the actin family.
    
 0.742
A0A2Z6QJD3
Uncharacterized protein; Belongs to the actin family.
   
 0.741
A0A2Z6QM74
Uncharacterized protein.
    
 0.729
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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