STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RUJ3Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (485 aa)    
Predicted Functional Partners:
A0A2Z6S564
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.698
A0A2Z6SA11
Cytochrome b5 heme-binding domain-containing protein.
    
  0.698
A0A2Z6SD03
Uncharacterized protein.
    
  0.698
A0A2Z6RQ99
Phosphotransferase.
    
  0.634
A0A2Z6S336
Phosphotransferase.
    
  0.634
A0A2Z6R2M5
Uncharacterized protein.
    
  0.526
A0A2Z6QFH9
Uncharacterized protein.
    
  0.524
A0A2Z6QM37
Uncharacterized protein.
    
  0.524
A0A2Z6QUZ0
Uncharacterized protein.
    
  0.524
A0A2Z6R769
Uncharacterized protein.
    
  0.524
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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