STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RVL1Endo/exonuclease/phosphatase domain-containing protein. (437 aa)    
Predicted Functional Partners:
A0A2Z6RM96
Uncharacterized protein.
   
   0.872
A0A2Z6QX99
Slu7 domain-containing protein.
   
 
 0.700
A0A2Z6R0T9
Uncharacterized protein.
   
 
  0.700
A0A2Z6QC51
PWI domain-containing protein.
     
 0.698
A0A2Z6QPR0
Sde2_N_Ubi domain-containing protein.
   
  0.691
A0A2Z6QWM7
Uncharacterized protein.
   
 
  0.684
A0A2Z6R8G6
Smg4_UPF3 domain-containing protein.
   
 
  0.674
A0A2Z6SD89
MI domain-containing protein.
   
 
  0.665
A0A2Z6Q7C4
Cir_N domain-containing protein.
   
 
  0.664
A0A2Z6RCF2
Nkap_C domain-containing protein.
   
 
  0.649
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.