STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RVV9Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
A0A2Z6QPQ6
Uncharacterized protein.
   
 0.983
A0A2Z6RY15
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.974
A0A2Z6RTJ6
Uncharacterized protein.
    
 0.948
A0A2Z6SCH7
Uncharacterized protein.
    
 0.923
A0A2Z6RK86
Uncharacterized protein.
    
 0.879
A0A2Z6R4N7
Uncharacterized protein.
   
 
 0.857
A0A2Z6RYJ4
Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.
    
 0.835
A0A2Z6Q4H7
J domain-containing protein.
   
 0.797
A0A2Z6SRA0
J domain-containing protein.
   
 0.797
A0A2Z6Q0Q5
FCP1 homology domain-containing protein.
    
 0.774
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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