STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RX39Uncharacterized protein. (176 aa)    
Predicted Functional Partners:
A0A2Z6QL15
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.973
A0A2Z6RXF4
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.771
A0A2Z6RBX8
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.750
A0A2Z6RIH3
Nudix hydrolase domain-containing protein.
    
 0.750
A0A2Z6RXG7
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.750
A0A2Z6RQQ4
PCI domain-containing protein.
    
 0.726
A0A2Z6QSH0
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.715
A0A2Z6RA25
PCI domain-containing protein.
    
 0.701
A0A2Z6QSZ2
VWFA domain-containing protein.
    
 0.698
A0A2Z6S5W7
PCI domain-containing protein.
    
 0.690
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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