STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RXH1Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
A0A2Z6RJ31
ERCC4 domain-containing protein.
    
 0.777
A0A2Z6QP87
Uncharacterized protein.
   
 0.703
A0A2Z6RCV3
Uncharacterized protein.
   
 0.697
A0A2Z6S1D1
ERCC4 domain-containing protein.
   
 0.677
A0A2Z6QBK7
Uncharacterized protein.
    
 0.665
A0A2Z6Q8J1
Ribonuclease P protein subunit.
   
 0.663
A0A2Z6RHZ1
RING-type domain-containing protein.
    
  0.662
A0A2Z6SGH4
Uncharacterized protein.
    
 0.662
A0A2Z6RR18
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
    
 0.659
A0A2Z6R150
Uncharacterized protein.
    
 0.654
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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