STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6S674Uncharacterized protein. (1017 aa)    
Predicted Functional Partners:
A0A2Z6RQI1
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.808
A0A2Z6QY35
RING-type domain-containing protein.
    
 0.805
A0A2Z6R5R8
SMC_N domain-containing protein.
    
 0.791
A0A2Z6RFQ6
SMC_N domain-containing protein.
    
 0.790
A0A2Z6RRV3
SP-RING-type domain-containing protein.
    
 0.789
A0A2Z6SRH6
Structural maintenance of chromosomes protein.
    
 0.657
A0A2Z6RJ58
SMC_N domain-containing protein.
    
 0.564
A0A2Z6RZ12
SMC hinge domain-containing protein.
    
 0.564
A0A2Z6S054
SMC_N domain-containing protein.
    
 0.564
A0A2Z6QNG7
Structural maintenance of chromosomes protein.
    
 0.521
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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