STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6S6A8Uncharacterized protein. (90 aa)    
Predicted Functional Partners:
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.913
A0A2Z6R0P8
Ubiquitin carboxyl-terminal hydrolase.
    
 0.907
A0A2Z6R883
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.899
A0A2Z6RVK9
Uncharacterized protein.
    
 0.896
A0A2Z6R613
Uncharacterized protein.
    
 0.889
A0A2Z6S9C8
TFIID_20kDa domain-containing protein.
    
 0.888
A0A2Z6S3H3
Uncharacterized protein.
    
 0.885
A0A2Z6QP80
Uncharacterized protein.
   
 0.878
A0A2Z6QQ07
SCA7 domain-containing protein.
    
 0.873
A0A2Z6S2A2
SCA7 domain-containing protein.
    
 0.873
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.