STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SA45Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
A0A2Z6QWJ3
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.669
A0A2Z6QE04
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
  0.654
A0A2Z6R0P8
Ubiquitin carboxyl-terminal hydrolase.
    
  0.642
A0A2Z6S886
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.637
A0A2Z6QVX5
Uncharacterized protein.
   
 
  0.619
A0A2Z6RYV9
Uncharacterized protein.
   
 
 0.609
A0A2Z6RJS5
TPR_REGION domain-containing protein.
    
  0.607
A0A2Z6RC34
SET domain-containing protein.
     
 0.597
A0A2Z6RIW7
Uncharacterized protein.
    
  0.554
A0A2Z6RQW1
Peptidylprolyl isomerase.
    
  0.526
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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