STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SB92Uncharacterized protein; Belongs to the OSBP family. (394 aa)    
Predicted Functional Partners:
A0A2Z6RPR4
Uncharacterized protein.
 
      0.899
A0A2Z6S6Q3
CRAL-TRIO domain-containing protein.
    
 
 0.818
A0A2Z6QEY5
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.784
A0A2Z6S834
Uncharacterized protein.
    
 
 0.689
A0A2Z6QL97
Uncharacterized protein; Belongs to the OSBP family.
   
0.678
A0A2Z6RKM5
SSD domain-containing protein.
   
 0.643
A0A2Z6Q4R1
Uncharacterized protein.
   
  0.624
A0A2Z6R3M0
Uncharacterized protein.
    
 0.610
A0A2Z6Q170
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.605
A0A2Z6R2G2
MSP domain-containing protein.
   
 
 0.585
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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