STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SD19Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
A0A2Z6QFA1
Plug_translocon domain-containing protein.
   
 0.964
A0A2Z6R8V7
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
   
 
 0.916
A0A2Z6SJL4
COX2_CUA domain-containing protein.
   
 
 0.916
A0A2Z6RB56
Tim44 domain-containing protein.
   
 
 0.848
A0A2Z6QY14
Tryptophan synthase.
   
  
 0.821
A0A2Z6RS39
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.799
A0A2Z6SNR9
Uncharacterized protein.
   
 
 0.774
A0A2Z6RV84
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.771
A0A2Z6RUI4
Uncharacterized protein.
   
 
 0.768
A0A2Z6Q715
RF_PROK_I domain-containing protein.
  
 
 0.767
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.