STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SHE8Uncharacterized protein. (1304 aa)    
Predicted Functional Partners:
A0A2Z6QGP2
Uncharacterized protein.
   
 0.999
A0A2Z6RGR7
WD_REPEATS_REGION domain-containing protein.
    
 0.999
A0A2Z6RPG1
Uncharacterized protein.
   
 0.964
A0A2Z6S1B3
Uncharacterized protein.
    
 0.961
A0A2Z6SBR1
Uncharacterized protein.
   
 0.961
A0A2Z6RNJ4
Uncharacterized protein.
   
 0.960
A0A2Z6QTN1
Uncharacterized protein.
   
 0.956
A0A2Z6RSU1
Uncharacterized protein.
    
 0.955
A0A2Z6S4Q3
Uncharacterized protein.
    
 0.944
A0A2Z6RJF8
Uncharacterized protein.
    
 0.936
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.