STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SHM7RING-type domain-containing protein. (520 aa)    
Predicted Functional Partners:
A0A2Z6RBB2
Uncharacterized protein.
    
  0.911
A0A2Z6S6G3
Ubiquitin-like domain-containing protein.
    
  0.911
A0A2Z6Q1K4
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.870
A0A2Z6Q3P3
Uncharacterized protein.
    
  0.845
A0A2Z6QZ66
Uncharacterized protein.
    
  0.845
A0A2Z6REB8
Uncharacterized protein.
    
  0.845
A0A2Z6RSJ5
Uncharacterized protein.
    
  0.845
A0A2Z6SE83
Uncharacterized protein.
    
  0.845
A0A2Z6SEP4
Uncharacterized protein.
    
  0.845
A0A2Z6SH31
Uncharacterized protein.
    
  0.845
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.