STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SL29Uncharacterized protein. (512 aa)    
Predicted Functional Partners:
A0A2Z6SCT4
Uncharacterized protein.
    
 
 0.781
A0A2Z6RMV6
Uncharacterized protein.
   
 
 0.744
A0A2Z6SEX0
Uncharacterized protein.
   
 
 0.744
A0A2Z6S8C3
2Fe-2S ferredoxin-type domain-containing protein.
    
 
 0.733
A0A2Z6QGA6
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
    
   0.666
A0A2Z6RL08
NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
   0.666
A0A2Z6RRV9
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.666
A0A2Z6S1S5
Uncharacterized protein.
    
   0.666
A0A2Z6QIF2
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
    
   0.657
A0A2Z6RGZ3
Uncharacterized protein.
    
   0.657
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.