STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SLL3SE domain-containing protein. (465 aa)    
Predicted Functional Partners:
A0A2Z6RUU2
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.997
A0A2Z6S224
3Beta_HSD domain-containing protein.
   
 
 0.987
A0A2Z6S8M0
Uncharacterized protein.
   
 
 0.984
A0A2Z6QUM8
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.980
A0A2Z6QMH6
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 0.977
A0A2Z6QQY7
Uncharacterized protein.
  
 
 0.955
A0A2Z6Q7J8
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.943
A0A2Z6QB06
Uncharacterized protein.
  
 
 0.937
A0A2Z6QI58
Uncharacterized protein.
   
 
 0.937
A0A2Z6S165
Uncharacterized protein.
   
 
 0.937
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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