STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SLX2Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (445 aa)    
Predicted Functional Partners:
A0A2Z6QKR7
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.968
A0A2Z6S118
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.968
A0A2Z6RBX9
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.966
A0A2Z6QE07
Citrate synthase; Belongs to the citrate synthase family.
  
 0.959
A0A2Z6QHC5
Citrate synthase; Belongs to the citrate synthase family.
  
 0.959
A0A2Z6RGZ3
Uncharacterized protein.
   
 
 0.959
A0A2Z6SIH2
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.958
A0A2Z6RAS8
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.941
A0A2Z6R421
Transket_pyr domain-containing protein.
   
 
 0.934
A0A2Z6R618
Uncharacterized protein.
  
 0.934
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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