STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SP27DNA_pol_B_2 domain-containing protein. (136 aa)    
Predicted Functional Partners:
A0A2Z6Q2V7
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.715
A0A2Z6RSE2
Ribosomal_L16 domain-containing protein.
   
 0.715
A0A2Z6RSA5
Ribosomal_L16 domain-containing protein.
   
 0.627
A0A2Z6Q6F1
Uncharacterized protein.
    
   0.501
A0A2Z6QPG0
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.501
A0A2Z6QS93
Uncharacterized protein.
    
   0.501
A0A2Z6RBC2
Uncharacterized protein.
    
   0.501
A0A2Z6RD34
L51_S25_CI-B8 domain-containing protein.
    
   0.501
A0A2Z6S9D5
Uncharacterized protein.
    
   0.501
A0A2Z6SL37
Uncharacterized protein.
    
   0.501
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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