STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SPH2Pyruvate carboxyltransferase domain-containing protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. (424 aa)    
Predicted Functional Partners:
A0A2Z6RZX9
Uncharacterized protein.
  
 
 0.948
A0A2Z6SE69
ACT domain-containing protein.
  
 
 0.899
A0A2Z6R0A3
Iso_dh domain-containing protein.
  
 0.889
A0A2Z6RBX9
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.887
A0A2Z6QM61
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
  
 0.836
A0A2Z6QR45
Uncharacterized protein.
  
 0.836
A0A2Z6S404
Acetyl-coenzyme A synthetase.
  
 
 0.833
A0A2Z6SIH2
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.833
A0A2Z6QKR7
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.828
A0A2Z6Q335
Succinate-CoA ligase subunit beta.
   
 0.825
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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